A fast and scalable tool for bacterial pangenome analysis
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
gff
A set of GFF3 formatted files
*.{gff}
versions
File containing software versions
versions.yml
results
Directory containing Panaroo result files
*/*
aln
Core-genome alignment produced by Panaroo (Optional)
*.{fasta}
panaroo - an updated pipeline for pangenome investigation
