Pacbio ccs - Generate Higly Accurate Single-Molecule Consensus Reads
meta
Groovy Map containing sample information id: id of the split file
bam
Raw subreads bam
*.subreads.bam
pbi
Pacbio BAM Index
*.pbi
chunk_num
BAM part to process
chunk_on
Total number of bam parts to process
Groovy Map containing sample information e.g. [ id:‘test’, single_end
versions
File containing software versions
versions.yml
CCS sequences in bam format
*.bam
PacBio Index of CCS sequences
report_txt
Summary of CCS in txt format
.txt
report_json
Summary of CCS in txt json
.json
metrics
Metrics about zmws
*.json.gz
pbccs - Generate Highly Accurate Single-Molecule Consensus Reads (HiFi Reads)
