Manipulation, validation and exploration of pedigrees
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
vcf
VCF file
*.{vcf.gz}
ped
PED/FAM file
*.{ped,fam}
vcf_tbi
TBI file
*.{vcf.gz.tbi}
*.peddy.{ped}
html
HTML file
*.{html}
csv
CSV file
*.{csv}
png
PNG file
*.{png}
versions
File containing software versions
versions.yml
genotype, ped correspondence check, ancestry check, sex check. directly, quickly on VCF
