modules/pharokka_installdatabases

Install databases necessary for Pharokka’s functional analysis

pharokkaprokkabaktaphagefunctioninstalldatabase

https://github.com/nf-core/modules/[...]/modules/nf-core/pharokka/installdatabases

Description

Install databases necessary for Pharokka’s functional analysis

Input

No input parameters

Output

Name (Type)

Description

Pattern

`pharokka_db` (directory)

Directory pointing to Pharokka’s database

${prefix}/

`versions` (file)

File containing software versions

versions.yml

Tools

pharokka
MIT

Fast Phage Annotation Program

pharokka.readthedocs.io https://github.com/gbouras13/pharokka 10.1093/bioinformatics/btac776