Creates a sequence dictionary for a reference sequence.
Input
name:type
description
pattern
meta:map
Groovy Map containing sample information
e.g. [ id:‘test’, single_end:false ]
fasta:file
The reference fasta file
*.fasta
Output
name:type
description
pattern
reference_dict
meta:map
Groovy Map containing sample information
e.g. [ id:‘test’, single_end:false ]
*.dict:file
picard dictionary file
*.{dict}
versions
versions.yml:file
File containing software versions
versions.yml
Tools
picard
MIT
Creates a sequence dictionary file (with ".dict" extension) from a reference sequence provided in FASTA format, which is required by many processing and analysis tools. The output file contains a header but no SAMRecords, and the header contains only sequence records.
