Verify mate-pair information between mates and fix if needed
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
bam
BAM file
*.{bam}
versions
File containing software versions
versions.yml
mate-pair verified BAM file
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
