changes name of sample in the vcf file
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
vcf{:bash}
:file
VCF file
*.{vcf,vcf.gz}
*.vcf.gz{:bash}
versions_picard{:bash}
${task.process}{:bash}
:string
The process the versions were collected from
picard{:bash}
The tool name
picard RenameSampleInVcf --version 2>&1 | sed -n 's/.*Version://p'{:bash}
The command used to generate the version of the tool
versions{:bash}
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
