Apply a scoring system to each sample in a plink 2 fileset
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
pgen{:bash}
:file
PLINK 2 binary genotype table
*.{pgen}
psam{:bash}
PLINK 2 sample information file
*.{psam}
pvar{:bash}
PLINK 2 variant information file
*.{pvar}
scorefile{:bash}
A text file containing variant identifiers and weights
*.{scores,txt,scorefile}
score{:bash}
*.sscore{:bash}
A text file containing sample scores, in plink 2 .sscore format
*.{sscore}
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
Whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner
