Subset plink bfiles with a text file of variant identifiers
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
bed:file
PLINK binary biallelic genotype table
*.{bed}
bim:file
PLINK extended MAP file
*.{bim}
fam:file
PLINK sample information file
*.{fam}
variants:file
A text file containing variant identifiers to keep (one per line)
*.{keep}
bed
*.bed:file
bim
*.bim:file
fam
*.fam:file
versions
versions.yml:file
File containing software versions
versions.yml
Whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner.
