Analyses variant calling files using plink
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
vcf
Variant calling file (vcf)
*.{vcf}
versions
File containing software versions
versions.yml
bed
PLINK binary biallelic genotype table
*.{bed}
bim
PLINK extended MAP file
*.{bim}
fam
PLINK sample information file
*.{fam}
Whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner
