Extension of Porechop whose purpose is to process adapter sequences in ONT reads.
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
reads
fastq/fastq.gz file
*.{fastq,fastq.gz,fq,fq.gz}
versions
File containing software versions
versions.yml
Adapter-trimmed fastq.gz file
*fastq.gz
log
Log file containing stdout information
*.log
