Description

Filter reads by quality score.

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]

reads (file)

fastq file

*.{fastq}

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]

versions (file)

File containing software versions

versions.yml

reads (file)

filtered fastq file

*.{fastq}

logs (file)

command logs

*.txt

log_tab (file)

parsed log table

*.tab

Tools

presto
AGPL v3

A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.