Description

Perform Gene Ratio Enrichment Analysis

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information.
This can be used at the workflow level to pass optional parameters to the module.
[id: ‘test’, …]

meta2 (map)

Groovy map containing study-wide metadata related to the knowledge database

adj (file)

adjacency matrix for gene ratio proportionality/differential proportionality

*.{csv,tsv}

gmt (file)

relational database containing genes and GO terms (generated by mygene module)

*.{gmt}

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information.
This can be used at the workflow level to pass optional parameters to the module.
[id: ‘test’, …]

enrichedGO (file)

File containing GO terms and their enrichment values

*.{csv}

versions (file)

File containing software versions

versions.yml
maintainer
Github user caraiz2001
get in touch
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