Plots the read coverage from a purge dups statistics file and cutoffs.
meta
:map
Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
[ id:'test', single_end:false ]
statfile
:file
A Purge dups statistic file
*.stat
cutoff
A Purge dups cutoff file
*.cutoffs
png
*.png
A png file of the read depth coverage.
versions_purgedups
${task.process}
:string
The name of the process
purge_dups
The name of the tool
1.2.6
The expression to obtain the version of the tool
versions
Purge_dups is a package used to purge haplotigs and overlaps in an assembly based on read depth