Description

write your description here

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

summary (file)

sequencing summary file

*.{txt}

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

html (file)

Results in HTML format

json (file)

Results in JSON format

*.{json}

versions (file)

File containing software versions

versions.yml
included in
viralrecon
maintainers
Github user joseespinosa
Github user drpatelh
get in touch
Ask a question on Slack Open an issue on GitHub

Tools

pycoqc
GNU General Public v3 (GPL v3)

PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data

github.com/tleonardi/pycoQC tleonardi.github.io/pycoQC https://github.com/tleonardi/pycoQC 10.21105/joss.01236