Description

Demultiplexer for Nanopore samples

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

reads (file)

Non-demultiplexed fastq files

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

reads (file)

Demultiplexed fastq samples

*.fastq.gz

versions (file)

File containing software versions

versions.yml
authors
Github user yuukiiwa Github user drpatelh
get in touch
Ask a question on Slack Open an issue on GitHub

Tools

qcat
MPL-2.0

A demultiplexer for Nanopore samples

github.com/nanoporetech/qcat github.com/nanoporetech/qcat#qcat