Description

Demultiplexer for Nanopore samples

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

reads:file

Non-demultiplexed fastq files

barcode_kit:string

Barcode kit used for demultiplexing

Output

name:type
description
pattern

reads

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

fastq/*.fastq.gz:file

Demultiplexed fastq samples

*.fastq.gz

versions

versions.yml:file

File containing software versions

versions.yml

Tools

qcat
MPL-2.0

A demultiplexer for Nanopore samples