Randomly subsample sequencing reads to a specified coverage
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
reads{:bash}
:file
List of input paired-end FastQ files
genome_size{:bash}
:string
Genome size of the species
depth_cutoff{:bash}
:integer
Depth of coverage cutoff
*.fastq.gz{:bash}
Reads with subsampled coverage
*.fastq.gz
versions_rasusa{:bash}
${task.process}{:bash}
The name of the process
rasusa{:bash}
The name of the tool
rasusa --version 2>&1 | sed -e "s/rasusa //g"{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
