Randomly subsample sequencing reads to a specified coverage
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
reads:file
List of input paired-end FastQ files
genome_size:string
Genome size of the species
depth_cutoff:integer
Depth of coverage cutoff
reads
*.fastq.gz:file
Reads with subsampled coverage
*.fastq.gz
versions
versions.yml:file
File containing software versions
versions.yml
