De novo genome assembler for long uncorrected reads.
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, suffix:‘bacteria’ ]
reads{:bash}
:file
Input file in FASTA/FASTQ format.
*.{fasta,fastq,fasta.gz,fastq.gz,fa,fq,fa.gz,fq.gz}
fasta{:bash}
*.fasta.gz{:bash}
Assembled FASTA file
*.fasta.gz
gfa{:bash}
*.gfa.gz{:bash}
Repeat graph
*.gfa.gz
versions_raven{:bash}
${task.process}{:bash}
:string
The name of the process
raven{:bash}
The name of the tool
raven --version{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
Raven is a de novo genome assembler for long uncorrected reads.
