modules/raxmlng

RAxML-NG is a phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion.

phylogenynewickmaximum likelihood

Description

RAxML-NG is a phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion.

name:type

description

pattern

Groovy Map containing sample information (e.g. [ id:‘sample1’ ])

A FASTA format multiple sequence alignment file

*.{fasta,fas,fa,mfa}

The substitution model to use for the phylogenetic inference

name:type

description

pattern

Groovy Map containing sample information

*.{raxml.bestTree}

A phylogeny in Newick format

*.{raxml.bestTree}

Groovy Map containing sample information

*.{raxml.support}

A phylogeny in Newick format with bootstrap values

*.{raxml.bootstraps}

File containing software versions

versions.yml

RAxML-NG is a phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion.