Call regions of homozygosity and make tentative UPD calls
meta:map
Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]
[ id:'sample1', single_end:false ]
vcf:file
VCF file
*.{vcf}
meta2:map
roh:file
Input RHO file produced from rhocall
*.{roh}
bed
${prefix}/${prefix}.bed:file
Bed file containing roh calls
*.{bed}
wig
${prefix}/${prefix}.wig:file
Wig file containing roh calls
*.{wig}
versions
versions.yml:file
File containing software versions
versions.yml
Call regions of homozygosity and make tentative UPD calls.
