Accurate detection of short and long active ORFs using Ribo-seq data
meta:map
Groovy Map containing reference information e.g. [ id:'Ensembl human v.111' ]
[ id:'Ensembl human v.111' ]
fasta:file
Fasta-format sequence file for reference sequences used in the bam file
*.gtf
gtf:file
GTF-format annotation file for reference sequences used in the bam file
candidate_orfs
*_candidate_orfs.tsv:file
TSV file with candidate ORFs
*.tsv
versions
versions.yml:file
File containing software versions
versions.yml
Python package to detect translating ORF from Ribo-seq data
