Description

Plot ROC curves from vcfeval ROC data files, either to an image, or an interactive GUI. The interactive GUI isn’t possible for nextflow.

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

input{:bash}

:file

Input TSV ROC files created with RTGTOOLS_VCFEVAL

*.tsv.gz

Output

name:type
description
pattern

png{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.png{:bash}

:file

The resulting rocplot in PNG format

*.png

svg{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.svg{:bash}

:file

The resulting rocplot in SVG format

*.svg

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml

Tools

maintainer
Github user nvnieuwk
get in touch
Ask a question on Slack Open an issue on GitHub