find and mark duplicate reads in BAM file
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
bam:file
BAM/CRAM/SAM file
*.{bam,cram,sam}
bam
*.bam:file
Sorted BAM/CRAM/SAM file
bai
*.bai:file
An optional BAM index file.
*.{bai}
versions
versions.yml:file
File containing software versions
versions.yml
process your BAM data faster!
