Concatenate BAM or CRAM file
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
input_files
BAM/CRAM files
*.{bam,cram}
bam
Concatenated BAM file
*.{bam}
cram
Concatenated CRAM file
*.{cram}
versions
File containing software versions
versions.yml
SAMtools is a set of utilities for interacting with and post-processing short DNA sequence read alignments in the SAM, BAM and CRAM formats, written by Heng Li. These files are generated as output by short read aligners like BWA.
