Create a sequence dictionary file from a FASTA file
Input
name:type
description
pattern
meta:map
Groovy Map containing sample information
e.g. [ id:‘test’, single_end
]
fasta:file
FASTA file
*.{fa,fasta}
Output
name:type
description
pattern
dict
meta:map
Groovy Map containing sample information
e.g. [ id:‘test’, single_end
]
*.dict:file
FASTA dictionary file
*.{dict}
versions
versions.yml:file
File containing software versions
versions.yml
Tools
samtools
MIT
SAMtools is a set of utilities for interacting with and post-processing
short DNA sequence read alignments in the SAM, BAM and CRAM formats, written by Heng Li.
These files are generated as output by short read aligners like BWA.
