metagenomic binning with self-supervised learning
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
fasta:file
Fasta file of the assembled contigs
*.{fa,fasta,fna,fa.gz,fasta.gz,fna.gz}
bam:file
BAM/CRAM/SAM file
*.{bam,cram}
csv
*.csv:file
generated files
*.csv
model
*.h5:file
model file
*.h5
output_fasta
output_prerecluster_bins/*.fa:file
precluster fasta files
*.fa
recluster_fasta
output_recluster_bins/*.fa:file
recluster fasta files
tsv
*.tsv:file
information of bins
*.tsv
versions
versions.yml:file
File containing software versions
versions.yml
Metagenomic binning with semi-supervised siamese neural network
