Output
Name (Type)
Description
Pattern
File containing the information about mean base quality score for each sequencing cycle
*.txt
File containing the information about number of bases with a specific base quality score
*.txt
File containing the information about GC bias in the reference and the sample
*.txt
File containing the information about GC bias in the reference and the sample
*.txt
Tools
sentieon
Sentieon® provides complete solutions for secondary DNA/RNA analysis for a variety of sequencing platforms, including short and long reads. Our software improves upon BWA, STAR, Minimap2, GATK, HaplotypeCaller, Mutect, and Mutect2 based pipelines and is deployable on any generic-CPU-based computing system.