Concatenating multiple uncompressed sequence files together
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]
[ id:'sample1', single_end:false ]
input{:bash}
:file
Sequence file in fasta/q format
*.{fasta,fastq,fa,fq,fas,fna,faa}
fastx{:bash}
*.{fasta,fastq,fa,fq,fas,fna,faa}{:bash}
A concatenated sequence file
versions_seqkit{:bash}
${task.process}{:bash}
:string
The name of the process
seqkit{:bash}
The name of the tool
seqkit version | sed 's/^.*v//'{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
Cross-platform and ultrafast toolkit for FASTA/Q file manipulation, written by Wei Shen.
