match up paired-end reads from two fastq files
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
reads
:file
List of input paired-end FastQ files.
*.paired.fastq.gz
Paired fastq reads
unpaired_reads
*.unpaired.fastq.gz
Unpaired reads (optional)
versions_seqkit
${task.process}
:string
The name of the process
seqkit
The name of the tool
seqkit version | sed 's/^.*v//'
:eval
The expression to obtain the version of the tool
versions
Cross-platform and ultrafast toolkit for FASTA/Q file manipulation, written by Wei Shen.
