Transforms sequences (extract ID, filter by length, remove gaps, reverse complement…)
meta:map
Groovy Map containing sample information e.g. [ id:'sample1' ]
[ id:'sample1' ]
fastx:file
Input fasta/fastq file
*.{fsa,fas,fa,fasta,fastq,fq,fsa.gz,fas.gz,fa.gz,fasta.gz,fastq.gz,fq.gz}
fastx
${prefix}.*:file
Output fasta/fastq file
*.{fasta,fasta.gz,fastq,fastq.gz}
versions
versions.yml:file
File containing software versions
versions.yml
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
