Split single or paired-end fastq.gz files
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
reads{:bash}
:file
FastQ files
*.{f[aq].gz/fast[aq].gz}
${prefix}/*{:bash}
Split fastq files
*.{f[aq][.gz]/fast[aq][.gz]}
versions_seqkit{:bash}
${task.process}{:bash}
:string
The name of the process
seqkit{:bash}
The name of the tool
seqkit version | sed 's/^.*v//'{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
Cross-platform and ultrafast toolkit for FASTA/Q file manipulation, written by Wei Shen.
