Rename sequence names in FASTQ or FASTA files.
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’ ]
sequences{:bash}
:file
A FASTQ or FASTA file
*.{fastq.gz, fastq, fq, fq.gz, fasta, fastq.gz, fa, fa.gz, fas, fas.gz, fna, fna.gz}
*.gz{:bash}
FASTQ/FASTA file containing renamed sequences
*.{fastq.gz, fasta.gz}
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. The seqtk rename command renames sequence names.
