Select only sequences that match the filtering condition
meta
Groovy Map containing sample information e.g. [ id:‘test’ ]
sequences
FASTQ/FASTA file
*.{fq,fq.gz,fa,fa.gz}
filter_list
BED file or a text file with a list of sequence names
*.{bed,lst}
versions
File containing software versions
versions.yml
*.{fq.gz,fa.gz}
Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format