Groovy Map containing sample information
e.g. [ id:‘test’, single_end:false ]
output/most_frequent_unmatched.tsv:file
File containing approx. counts of barcodes that did not match the expected barcodes
output/most_frequence_unmatched.tsv
per_project_metrics
meta:map
Groovy Map containing sample information
e.g. [ id:‘test’, single_end:false ]
output/per_project_metrics.tsv:file
Summary metrics for samples in the same project
output/per_project_metrics.tsv
per_sample_metrics
meta:map
Groovy Map containing sample information
e.g. [ id:‘test’, single_end:false ]
output/per_sample_metrics.tsv:file
Summary metrics for each sample
output/per_sample_metrics.tsv
sample_barcode_hop_metrics
meta:map
Groovy Map containing sample information
e.g. [ id:‘test’, single_end:false ]
output/sample_barcode_hop_metrics.tsv:file
File output for dual-indexed runs with barcodes which are unexpected combinations of
expected barcodes e.g. expected barcodes = AA-TT/GG-CC and observed barcodes = AA-CC/GG-TT
output/sample_barcode_hop_metrics/tsv
versions
versions.yml:file
File containing software versions
versions.yml
Tools
sgdemux
For Singular G4™ Sequencing Platform only
Tool for demultiplexing sequencing data generated on Singular Genomics' sequencing instruments.
