modules/shinyngs_staticexploratory
Make exploratory plots for analysis of matrix data, including PCA, Boxplots and density plots
Description
Make exploratory plots for analysis of matrix data, including PCA, Boxplots and density plots
Input
Groovy Map containing information on variables for use in plots,
probably experimental information, but at a minimum an id.
e.g. [ id:‘treatment’ ]
Output
Meta-keyed tuple containing PNG output for density plots
covering input matrices.
Meta-keyed tuple containing HTML output for density plots
covering input matrices.
Meta-keyed tuple containing a PNG output for 2D PCA plots covering
specified input matrix (by default the last one in the input list.
Meta-keyed tuple containing an HTML output for 2D PCA plots covering
specified input matrix (by default the last one in the input list.
Meta-keyed tuple containing a PNG output for 3D PCA plots covering
specified input matrix (by default the last one in the input list.
Meta-keyed tuple containing an HTML output for 3D PCA plots covering
specified input matrix (by default the last one in the input list.
Meta-keyed tuple containing a PNG output for MAD correlation plots
covering specified input matrix (by default the last one in the input
list.
Meta-keyed tuple containing an HTML output for MAD correlation plots
covering specified input matrix (by default the last one in the input
list.
Meta-keyed tuple containing a PNG, for a sample clustering
dendrogramcovering specified input matrix (by default the last one in
the input list.
included in
maintainer
