modules/singlem_dbdownload
Download the SingleM metapackage database used for metagenome profiling
metagenomicsdatabasedownloadprofilingsinglemmetapackage
Tools
singlemGPL-3.0-or-later
SingleM is a tool for profiling shotgun metagenomes. It determines the relative abundance of bacterial and archaeal taxa in a sample and can also profile dsDNA phages. It has particular strength in dealing with novel lineages and is suitable for tasks such as assessing eukaryotic contamination, finding bias in genome recovery, and lineage-targeted MAG recovery.
maintainer
