Fast, efficient, lossless compression of FASTQ files.
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
fastq{:bash}
:file
Either a single-end FASTQ file or paired-end files.
*.{fq.gz,fastq.gz}
sfq{:bash}
*.sfq{:bash}
Either one or two sequence files in slimfastq compressed format.
*.{sfq}
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
slimfastq efficiently compresses/decompresses FASTQ files
