structural-variant calling with sniffles
meta
Groovy Map containing sample information e.g. [ id:‘test’ ]
bam
BAM file
*.bam
bai
Index of BAM file
*.bai
meta2
Groovy Map containing reference information e.g. [ id:‘fasta’ ]
fasta
Reference database in FASTA format
vcf
Compressed VCF file
*.vcf.gz
snf
Compressed SNF file
*.snf.gz
versions
File containing software versions
versions.yml
a fast structural variant caller for long-read sequencing
