Rapidly extracts SNPs from a multi-FASTA alignment.
alignment:file
fasta alignment file
*.{fasta,fas,fa,aln}
fasta
*.fas:file
Variant fasta file
*.{fas}
constant_sites
*.sites.txt:file
Text file containing counts of constant sites
*.{sites.txt}
versions
versions.yml:file
File containing software versions
versions.yml
constant_sites_string
CONSTANT_SITES:integer
Value with the number of constant sites
