Description

Create a database of sourmash signatures (a group of FracMinHash sketches) to be used as references.

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

signatures:file

Files containing signature (hash sketches) of reference genomes

*.{sig}

ksize:integer

ksize value

Output

name:type
description
pattern

signature_index

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.sbt.zip:file

Database of signatures

*.{sbt.zip}

versions

versions.yml:file

File containing software versions

versions.yml

Tools

sourmash
BSD-3-clause

Compute and compare FracMinHash signatures for DNA data sets.