Fast, efficient, lossless compression of FASTQ files.
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
fastq1{:bash}
:file
FASTQ file to compress.
*.{fq.gz,fastq.gz}
fastq2{:bash}
Parired FASTQ file fon non single-end experiments.
spring{:bash}
*.spring{:bash}
One sequence file in spring compressed format.
*.{spring}
versions_spring{:bash}
${task.process}{:bash}
:string
The name of the process
The name of the tool
1.1.1{:bash}
The expression to obtain the version of the tool
versions{:bash}
SPRING is a compression tool for Fastq files (containing up to 4.29 Billion reads)
