Fast, efficient, lossless decompression of FASTQ files.
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
spring{:bash}
:file
Spring file to decompress.
*.{spring}
write_one_fastq_gz{:bash}
:boolean
Controls whether spring should write one fastq.gz file with reads from both directions or two fastq.gz files with reads from distinct directions
true or false
fastq{:bash}
*.fastq.gz{:bash}
Decompressed FASTQ file(s).
*.{fastq.gz}
versions_spring{:bash}
${task.process}{:bash}
:string
The name of the process
The name of the tool
1.1.1{:bash}
The expression to obtain the version of the tool
versions{:bash}
SPRING is a compression tool for Fastq files (containing up to 4.29 Billion reads)
