Predicts Staphylococcus aureus SCCmec type based on primers.
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
fasta:file
FASTA assembly file
*.{fasta,fasta.gz,fa,fa.gz,fna,fna.gz}
tsv
*.tsv:file
Tab-delimited results
*.{tsv}
versions
versions.yml:file
File containing software versions
versions.yml
