Description

Create index for STAR

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

fasta:file

Fasta file of the reference genome

meta2:map

Groovy Map containing reference information e.g. [ id:‘test’ ]

gtf:file

GTF file of the reference genome

Output

name:type
description
pattern

index

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

star:directory

Folder containing the star index files

star

versions

versions.yml:file

File containing software versions

versions.yml

Tools

star
MIT

STAR is a software package for mapping DNA sequences against a large reference genome, such as the human genome.