Description

Merges the annotation gtf file and the stringtie output gtf files

Input

Name (Type)
Description
Pattern

stringtie_gtf (file)

Stringtie transcript gtf output(s).

*.gtf

annotation_gtf (file)

Annotation gtf file (optional).

*.gtf

Output

Name (Type)
Description
Pattern

merged_gtf (map)

Merged gtf from annotation and stringtie output gtfs.

*.gtf

versions (file)

File containing software versions

versions.yml

Tools

stringtie2
MIT

Transcript assembly and quantification for RNA-Seq