Converts VCFs containing structural variants to BED format
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
vcf
:file
A VCF file created with a structural variant caller
*.vcf.gz
tbi
The index for the VCF file
*.vcf.gz.tbi
bed
*.bed
The created BED file
versions_svtk
${task.process}
:string
The process the versions were collected from
svtk
The tool name
0.0.20190615
The expression to obtain the version of the tool
versions
Utilities for consolidating, filtering, resolving, and annotating structural variants.
