Converts VCFs containing structural variants to BED format
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
vcf{:bash}
:file
A VCF file created with a structural variant caller
*.vcf.gz
tbi{:bash}
The index for the VCF file
*.vcf.gz.tbi
bed{:bash}
*.bed{:bash}
The created BED file
*.bed
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
Utilities for consolidating, filtering, resolving, and annotating structural variants.
