Description

Compresses/decompresses files

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

input (file)

file to compress or to decompress

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

output (file)

Output compressed/decompressed file

*.

gzi (file)

Optional gzip index file for compressed inputs

*.gzi

versions (file)

File containing software versions

versions.yml

Tools

bgzip
MIT

Bgzip compresses or decompresses files in a similar manner to, and compatible with, gzip.