Description

create tabix index from a sorted bgzip tab-delimited genome file

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

tab (file)

TAB-delimited genome position file compressed with bgzip

*.{bed.gz,gff.gz,sam.gz,vcf.gz}

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

tbi (file)

tabix index file

*.{tbi}

csi (file)

coordinate sorted index file

*.{csi}

versions (file)

File containing software versions

versions.yml

Tools

tabix
MIT

Generic indexer for TAB-delimited genome position files.