Compares 2 alternative MSAs to evaluate them.
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, … ]
msa:file
fasta file containing the alignment to be evaluated. Can be gzipped or uncompressed
*.{aln,fa,fasta,fas}{.gz,}
ref_msa:file
fasta file containing the reference alignment used for the evaluation. Can be gzipped or uncompressed
scores
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
*.scores:file
a file containing the score of the alignment
*.scores
versions
versions.yml:file
File containing software versions
versions.yml
A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence
Parallel implementation of the gzip algorithm.
