Computes the irmsd score for a given alignment and the structures.
meta
Groovy Map containing sample information e.g. [ id:‘test’, … ]
msa
fasta file containing the alignment to be evaluated. May be gzipped or uncompressed.
*.{aln,fa,fasta,fas}{.gz,}
template
Template file matching the structures to the sequences in the alignment.
*
structures
Directory containing the structures file matching the sequences in the alignment in PDB format
Groovy Map containing sample information e.g. [ id:‘test’, single_end
versions
File containing software versions
versions.yml
irmsd
File containing the irmsd of the alignment
A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence
Parallel implementation of the gzip algorithm.